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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018640.1_18988_19101_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18988 - 19101

Intron Length:

114

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAAAC

5'SS Class:

strong_major

3'SS Sequence:

TGCTTTGTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAA

U12 Branch Point Sequence:

CGGGGCTGAAAG

Flanking Amino Acid:

SEHIKRCTDKGVESVFDIME

Intron Amino Acid Position:

1927

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

77.5

30.5

Major BPS

49.7

-0

1.3

43.1

41.8

Major PPT

0.61

0.9

72.1

37.9

Minor 5ss

33.1

-1.9

42.8

44.4

Minor BPS

-0.8

37.83

44.5

Associated Gene:

Gene:

SNRNP200

Ensembl Gene ID:

ENSAPLG00000004313

Chromosome:

PEDO01018640.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031008

639 - 20092

19454

ENSAPLT00000004616

21 - 20092

20072