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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018640.1_19263_19352_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19263 - 19352

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGCAG

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCCACGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

CTTCTCTCCACG

Flanking Amino Acid:

YEVVEKESIRSGGPVVVLVQ

Intron Amino Acid Position:

1980

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

65.6

41.7

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

74.5

0.55

0.8

69.7

29.9

Minor 5ss

24.7

-2.9

28.6

43.8

Minor BPS

46.9

-0.3

56.4

45.1

Associated Gene:

Gene:

SNRNP200

Ensembl Gene ID:

ENSAPLG00000004313

Chromosome:

PEDO01018640.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004616

21 - 20092

20072

ENSAPLT00000031008

639 - 20092

19454