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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018640.1_19435_19518_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19435 - 19518

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TCTTCCCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTGAC

U12 Branch Point Sequence:

CACCCCTTGACC

Flanking Amino Acid:

GPVIAPLFPQKREEGWWVVI

Intron Amino Acid Position:

2008

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

69.5

35.4

Major BPS

61.6

0.29

1.1

54.6

40.8

Major PPT

79.1

0.65

0.7

73.6

24.6

Minor 5ss

27.4

-2.6

3.2

35.6

41.2

Minor BPS

64.4

0.44

1.3

64.21

41.5

Associated Gene:

Gene:

SNRNP200

Ensembl Gene ID:

ENSAPLG00000004313

Chromosome:

PEDO01018640.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031008

639 - 20092

19454

ENSAPLT00000004616

21 - 20092

20072