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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018640.1_2987_3460_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2987 - 3460

Intron Length:

474

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCAGC

5'SS Class:

strong_major

3'SS Sequence:

TGTCTTCTGCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGGTAAC

U12 Branch Point Sequence:

GCAGAGGTAACT

Flanking Amino Acid:

KADEVLEILKTASDDRECEN

Intron Amino Acid Position:

244

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.9

76.2

39.9

Major BPS

50.5

0.01

1.3

53.1

40.5

Major PPT

75.6

0.58

69.5

41.7

Minor 5ss

39.7

-1.2

2.9

52.1

44.7

Minor BPS

37.8

-0.8

2.6

54.01

Associated Gene:

Gene:

SNRNP200

Ensembl Gene ID:

ENSAPLG00000004313

Chromosome:

PEDO01018640.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031008

639 - 20092

19454

ENSAPLT00000004616

21 - 20092

20072