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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018640.1_3882_4836_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3882 - 4836

Intron Length:

955

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGGCTG

5'SS Class:

major

3'SS Sequence:

GGTCTCCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTCAG

U12 Branch Point Sequence:

GAGCGCTCAGTT

Flanking Amino Acid:

HETEKEDLIREERSRRERVR

Intron Amino Acid Position:

323

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

1.1

64.3

47.1

Major BPS

47.4

-0.1

1.6

54.7

43.1

Major PPT

0.61

0.9

69.6

36.7

Minor 5ss

33.9

-1.8

3.4

39.3

Minor BPS

40.6

-0.6

51.87

42.6

Associated Gene:

Gene:

SNRNP200

Ensembl Gene ID:

ENSAPLG00000004313

Chromosome:

PEDO01018640.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031008

639 - 20092

19454

ENSAPLT00000004616

21 - 20092

20072