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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018640.1_4921_5131_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4921 - 5131

Intron Length:

211

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGACTC

5'SS Class:

strong_major

3'SS Sequence:

TTGCTGTCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAC

U12 Branch Point Sequence:

CCTGTCTCACTC

Flanking Amino Acid:

ETMDLDQGGEALAPRQVLDL

Intron Amino Acid Position:

351

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.8

35.2

Major BPS

67.3

0.43

1.2

71.3

36.7

Major PPT

74.9

0.56

0.9

69.8

36.6

Minor 5ss

31.1

-2.2

3.2

41.7

Minor BPS

43.8

-0.4

1.8

48.85

42.4

Associated Gene:

Gene:

SNRNP200

Ensembl Gene ID:

ENSAPLG00000004313

Chromosome:

PEDO01018640.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031008

639 - 20092

19454

ENSAPLT00000004616

21 - 20092

20072