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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018640.1_5306_5989_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5306 - 5989

Intron Length:

684

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCGGTGAC

5'SS Class:

major

3'SS Sequence:

TTTCCCTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

TCGAGTTTGATT

Flanking Amino Acid:

LKPKPFGSEEQLVSVEKLPK

Intron Amino Acid Position:

409

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.5

1.3

66.7

39.6

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

90.4

0.91

0.6

88.5

20.9

Minor 5ss

-2.6

3.2

34.3

Minor BPS

-0

1.8

62.53

42.7

Associated Gene:

Gene:

SNRNP200

Ensembl Gene ID:

ENSAPLG00000004313

Chromosome:

PEDO01018640.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031008

639 - 20092

19454

ENSAPLT00000004616

21 - 20092

20072