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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018640.1_6128_6296_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6128 - 6296

Intron Length:

169

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGGGTG

5'SS Class:

strong_major

3'SS Sequence:

ACTTGCCATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTGAT

U12 Branch Point Sequence:

CTGGTTCTACTT

Flanking Amino Acid:

DENLLLCAPTGAGKTNVALM

Intron Amino Acid Position:

455

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

68.2

Major BPS

82.5

0.81

0.8

71.4

36.6

Major PPT

0.38

0.9

63.6

37.9

Minor 5ss

33.3

-1.9

3.7

47.2

48.2

Minor BPS

41.8

-0.5

1.9

54.6

42.6

Associated Gene:

Gene:

SNRNP200

Ensembl Gene ID:

ENSAPLG00000004313

Chromosome:

PEDO01018640.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031008

639 - 20092

19454

ENSAPLT00000004616

21 - 20092

20072