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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018640.1_62052_62166_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

62052 - 62166

Intron Length:

115

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGCGGG

5'SS Class:

major

3'SS Sequence:

GGGGTGCTCGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCTGAT

U12 Branch Point Sequence:

CCCCCCCCAACC

Flanking Amino Acid:

ALKELVLHNPVIVQPQEPRL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

54.4

44.7

Major BPS

66.4

0.41

1.1

56.9

40.5

Major PPT

58.9

0.2

1.1

50.1

43.9

Minor 5ss

30.8

-2.2

3.3

38.2

46.7

Minor BPS

45.9

-0.3

1.9

52.85

44.5

Associated Gene:

Gene:

DDX56

Ensembl Gene ID:

ENSAPLG00000025410

Chromosome:

PEDO01018640.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047683

61882 - 64849

2968

ENSAPLT00000035028

61882 - 64762

2881