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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018640.1_62412_62762_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

62412 - 62762

Intron Length:

351

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAACCCGC

5'SS Class:

weak_major

3'SS Sequence:

CGCGTGTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAG

U12 Branch Point Sequence:

CGGTGCTGAGGG

Flanking Amino Acid:

ALNSELPARSRCHVITQFNR

Intron Amino Acid Position:

119

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.5

0.32

1.3

49.3

47.4

Major BPS

52.2

0.06

1.6

51.1

46.3

Major PPT

63.4

0.3

53.1

41.6

Minor 5ss

44.2

-0.6

60.3

44.4

Minor BPS

-1.1

2.2

36.44

45.2

Associated Gene:

Gene:

DDX56

Ensembl Gene ID:

ENSAPLG00000025410

Chromosome:

PEDO01018640.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035028

61882 - 64762

2881

ENSAPLT00000047683

61882 - 64849

2968