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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018640.1_62886_63418_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62886 - 63418

Intron Length:

533

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCAGG

5'SS Class:

strong_major

3'SS Sequence:

CTCCCCCTCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCACAT

U12 Branch Point Sequence:

CTCCCCATCACA

Flanking Amino Acid:

PQKKRKGAADSKGKDPEYSV

Intron Amino Acid Position:

160

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

68.8

43.8

Major BPS

68.9

0.47

Major PPT

73.7

0.53

0.8

64.8

30.7

Minor 5ss

33.3

-1.9

2.8

39.7

45.9

Minor BPS

48.1

-0.1

2.1

61.46

44.5

Associated Gene:

Gene:

DDX56

Ensembl Gene ID:

ENSAPLG00000025410

Chromosome:

PEDO01018640.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047683

61882 - 64849

2968

ENSAPLT00000035028

61882 - 64762

2881