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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018640.1_64539_64635_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

64539 - 64635

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGTGCG

5'SS Class:

strong_major

3'SS Sequence:

TCTGCCCTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAG

U12 Branch Point Sequence:

TCTGCCCTTACA

Flanking Amino Acid:

AGAGRRGGPTARRNANPLQS

Intron Amino Acid Position:

354

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

66.2

39.6

Major BPS

0.65

1.5

85.7

34.9

Major PPT

79.8

0.67

0.8

72.5

32.3

Minor 5ss

-2.5

33.4

41.6

Minor BPS

50.8

0.02

2.1

68.09

Associated Gene:

Gene:

DDX56

Ensembl Gene ID:

ENSAPLG00000025410

Chromosome:

PEDO01018640.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047683

61882 - 64849

2968