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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018640.1_67713_68468_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

67713 - 68468

Intron Length:

756

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGGGTGCC

5'SS Class:

major

3'SS Sequence:

GTGTCCCCACCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTCAC

U12 Branch Point Sequence:

GTGTCCCCACCA

Flanking Amino Acid:

DWHDHLIYCVNSPLSFKDIT

Intron Amino Acid Position:

526

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.7

0.49

65.1

34.5

Major BPS

57.5

0.19

1.1

60.7

37.6

Major PPT

0.34

56.4

Minor 5ss

28.8

-2.4

3.3

35.2

35.1

Minor BPS

46.2

-0.2

2.1

61.32

44.3

Associated Gene:

Gene:

NPC1L1

Ensembl Gene ID:

ENSAPLG00000010428

Chromosome:

PEDO01018640.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039450

64783 - 76825

12043

ENSAPLT00000010896

65966 - 76305

10340