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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018640.1_69307_69915_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

69307 - 69915

Intron Length:

609

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCGGCGGC

5'SS Class:

major

3'SS Sequence:

TCCCGGCCAGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCCCAT

U12 Branch Point Sequence:

GGCACCCCAACC

Flanking Amino Acid:

NIFIFVQEYQQSQREPGETR

Intron Amino Acid Position:

722

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.7

0.3

1.4

57.2

41.6

Major BPS

59.9

0.25

1.3

70.1

Major PPT

61.1

0.25

54.6

35.2

Minor 5ss

30.7

-2.2

3.4

41.6

45.2

Minor BPS

-0.3

1.9

54.33

42.7

Associated Gene:

Gene:

NPC1L1

Ensembl Gene ID:

ENSAPLG00000010428

Chromosome:

PEDO01018640.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039450

64783 - 76825

12043

ENSAPLT00000010896

65966 - 76305

10340