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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018640.1_70031_70145_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

70031 - 70145

Intron Length:

115

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTGGG

5'SS Class:

major

3'SS Sequence:

GGGGTGCCCGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

GGGTGCTGACAC

Flanking Amino Acid:

SISEVICFLLGSLSSMPAVR

Intron Amino Acid Position:

760

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

63.1

43.4

Major BPS

66.3

0.4

1.1

41.8

Major PPT

55.9

0.13

46.8

41.5

Minor 5ss

26.2

-2.7

2.9

22.9

37.3

Minor BPS

40.3

-0.7

2.1

46.1

42.1

Associated Gene:

Gene:

NPC1L1

Ensembl Gene ID:

ENSAPLG00000010428

Chromosome:

PEDO01018640.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039450

64783 - 76825

12043

ENSAPLT00000010896

65966 - 76305

10340