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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018640.1_70974_71228_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

70974 - 71228

Intron Length:

255

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTCAGTGGG

5'SS Class:

major

3'SS Sequence:

GTGTTGCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

GGTGCCCTCACG

Flanking Amino Acid:

LLHRLVRPLVVLLFLFFSFA

Intron Amino Acid Position:

849

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.5

0.48

1.3

59.8

45.2

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

68.2

0.41

58.5

43.1

Minor 5ss

27.6

-2.6

2.9

29.2

Minor BPS

45.6

-0.4

2.2

53.66

46.6

Associated Gene:

Gene:

NPC1L1

Ensembl Gene ID:

ENSAPLG00000010428

Chromosome:

PEDO01018640.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039450

64783 - 76825

12043

ENSAPLT00000010896

65966 - 76305

10340