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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018640.1_71319_71604_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

71319 - 71604

Intron Length:

286

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGACACCC

5'SS Class:

major

3'SS Sequence:

CTGCCACCGCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGAGCAC

U12 Branch Point Sequence:

CCTCGCTGAGCA

Flanking Amino Acid:

GLDQEIAMPEDSYMLQYFAD

Intron Amino Acid Position:

879

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.5

1.2

59.5

39.8

Major BPS

45.3

-0.2

1.4

51.4

43.9

Major PPT

59.6

0.22

51.2

38.3

Minor 5ss

33.3

-1.9

3.1

43.3

43.8

Minor BPS

43.8

-0.4

2.1

53.45

44.7

Associated Gene:

Gene:

NPC1L1

Ensembl Gene ID:

ENSAPLG00000010428

Chromosome:

PEDO01018640.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010896

65966 - 76305

10340

ENSAPLT00000039450

64783 - 76825

12043