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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018640.1_73105_73198_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

73105 - 73198

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAGGTGCC

5'SS Class:

major

3'SS Sequence:

CCCCTCCCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGGTGAC

U12 Branch Point Sequence:

CCCTCCCCACAG

Flanking Amino Acid:

HDLPTLQCAKGGLGAYDTAV

Intron Amino Acid Position:

1025

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

1.1

68.7

37.6

Major BPS

45.4

-0.2

1.4

34.5

43.7

Major PPT

70.8

0.47

0.7

63.9

24.5

Minor 5ss

32.1

-2

3.3

35.7

41.2

Minor BPS

37.5

-1

44.9

Associated Gene:

Gene:

NPC1L1

Ensembl Gene ID:

ENSAPLG00000010428

Chromosome:

PEDO01018640.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039450

64783 - 76825

12043

ENSAPLT00000010896

65966 - 76305

10340