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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018640.1_73255_73325_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

73255 - 73325

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTGCG

5'SS Class:

strong_major

3'SS Sequence:

CTGCCCCCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAG

U12 Branch Point Sequence:

CCCGGCTGAGCC

Flanking Amino Acid:

VSMAANGTIMASRFMAYQRP

Intron Amino Acid Position:

1044

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

65.8

40.2

Major BPS

43.9

-0.3

1.6

36.8

44.4

Major PPT

67.8

0.4

0.8

58.1

33.1

Minor 5ss

27.1

-2.6

2.9

24.3

36.8

Minor BPS

39.5

-0.8

42.11

Associated Gene:

Gene:

NPC1L1

Ensembl Gene ID:

ENSAPLG00000010428

Chromosome:

PEDO01018640.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039450

64783 - 76825

12043

ENSAPLT00000010896

65966 - 76305

10340