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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018640.1_74827_74931_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

74827 - 74931

Intron Length:

105

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGGGCG

5'SS Class:

major

3'SS Sequence:

GTGGTGTCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTGAC

U12 Branch Point Sequence:

CTCACGATGACT

Flanking Amino Acid:

AEATVTMGSKVVAGVAMTNL

Intron Amino Acid Position:

1210

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

38.5

Major BPS

55.9

0.15

1.2

Major PPT

65.2

0.34

57.8

43.2

Minor 5ss

22.7

-3.1

3.4

28.9

43.8

Minor BPS

44.7

-0.3

2.3

64.69

45.8

Associated Gene:

Gene:

NPC1L1

Ensembl Gene ID:

ENSAPLG00000010428

Chromosome:

PEDO01018640.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039450

64783 - 76825

12043

ENSAPLT00000010896

65966 - 76305

10340