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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018640.1_75095_75195_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

75095 - 75195

Intron Length:

101

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGGCCC

5'SS Class:

major

3'SS Sequence:

TATTTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCGTTAT

U12 Branch Point Sequence:

ACCCCGTTATTT

Flanking Amino Acid:

VFLPVLLSYMGPSPRATPGD

Intron Amino Acid Position:

1264

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

1.1

62.8

40.3

Major BPS

56.4

0.16

1.3

44.8

Major PPT

79.8

0.67

0.8

74.3

30.4

Minor 5ss

31.6

-2.1

3.2

35.1

Minor BPS

44.7

-0.3

2.2

59.07

44.7

Associated Gene:

Gene:

NPC1L1

Ensembl Gene ID:

ENSAPLG00000010428

Chromosome:

PEDO01018640.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010896

65966 - 76305

10340