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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018640.1_8654_8828_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8654 - 8828

Intron Length:

175

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGATTGCG

5'SS Class:

major

3'SS Sequence:

GTTTTTGCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCAGAA

U12 Branch Point Sequence:

TGGCTCAGAAAC

Flanking Amino Acid:

VLRTEAEQCKNLELKDLLPY

Intron Amino Acid Position:

720

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.7

67.7

37.5

Major BPS

52.6

0.07

50.3

35.4

Major PPT

82.7

0.74

0.9

77.3

Minor 5ss

27.6

-2.6

2.9

32.7

42.1

Minor BPS

43.7

-0.4

1.7

51.95

38.2

Associated Gene:

Gene:

SNRNP200

Ensembl Gene ID:

ENSAPLG00000004313

Chromosome:

PEDO01018640.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031008

639 - 20092

19454

ENSAPLT00000004616

21 - 20092

20072