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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018640.1_90077_90165_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

90077 - 90165

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGCGGC

5'SS Class:

major

3'SS Sequence:

CCGTGCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTCAC

U12 Branch Point Sequence:

CCTGGCTCACGG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.56

57.9

41.8

Major BPS

52.1

0.05

1.3

41.8

Major PPT

64.4

0.32

0.9

36.6

Minor 5ss

31.7

-2.1

3.3

41.6

45.3

Minor BPS

34.2

-1.3

2.2

34.08

46.6

Associated Gene:

Gene:

GGCX

Ensembl Gene ID:

ENSAPLG00000017930

Chromosome:

PEDO01018640.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036558

89777 - 95238

5462