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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018640.1_90325_91659_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

90325 - 91659

Intron Length:

1335

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTACGGGGC

5'SS Class:

major

3'SS Sequence:

CGGGTGACAACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTGACAA

U12 Branch Point Sequence:

CGGGTGACAACA

Flanking Amino Acid:

MYLVYGVMLLGALGIMVGFC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.6

0.44

1.1

57.2

41.7

Major BPS

46.3

-0.2

1.3

52.7

43.2

Major PPT

51.8

0.04

1.1

43.8

41.2

Minor 5ss

28.1

-2.5

3.6

32.1

42.7

Minor BPS

35.1

-1.1

2.2

40.22

40.1

Associated Gene:

Gene:

GGCX

Ensembl Gene ID:

ENSAPLG00000017930

Chromosome:

PEDO01018640.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036558

89777 - 95238

5462