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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018640.1_98439_98529_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

98439 - 98529

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

CCTTTCCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAC

U12 Branch Point Sequence:

TCTTCCTTTCCC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

65.3

42.2

Major BPS

49.4

-0

1.3

42.8

41.8

Major PPT

78.6

0.64

0.7

73.1

25.1

Minor 5ss

28.6

-2.5

2.8

41.8

Minor BPS

46.7

-0.2

3.6

74.54

42.5

Associated Gene:

Gene:

MAT2A

Ensembl Gene ID:

ENSAPLG00000026391

Chromosome:

PEDO01018640.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046352

95283 - 99112

3830