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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018664.1_10435_10591_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10435 - 10591

Intron Length:

157

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGCTCTG

5'SS Class:

major

3'SS Sequence:

GTGTGTGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGGCAC

U12 Branch Point Sequence:

ACGGGGAGACCC

Flanking Amino Acid:

NFSILGPGLQGRRVLAHCKT

Intron Amino Acid Position:

342

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.3

0.5

1.2

63.6

48.1

Major BPS

-0.3

1.5

48.8

46.3

Major PPT

69.3

0.44

61.9

44.4

Minor 5ss

-0.9

3.2

58.1

46.5

Minor BPS

26.2

-1.8

2.2

29.5

Associated Gene:

Gene:

SCLY

Ensembl Gene ID:

ENSAPLG00000007985

Chromosome:

PEDO01018664.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008313

8411 - 13730

5320