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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018664.1_12012_12140_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12012 - 12140

Intron Length:

129

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

TCCTTCCTGCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTGAT

U12 Branch Point Sequence:

TGATACAGACCT

Flanking Amino Acid:

LANNETGVIMPVSKLSQHIH

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

70.5

41.3

Major BPS

68.9

0.47

1.2

60.7

45.9

Major PPT

0.56

0.9

37.1

Minor 5ss

32.5

-2

38.1

40.9

Minor BPS

43.8

-0.3

2.1

65.19

44.1

Associated Gene:

Gene:

SCLY

Ensembl Gene ID:

ENSAPLG00000007985

Chromosome:

PEDO01018664.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008313

8411 - 13730

5320