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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018664.1_12792_12881_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12792 - 12881

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGGTG

5'SS Class:

strong_major

3'SS Sequence:

TTCCTCTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CGTTCAT

U12 Branch Point Sequence:

CAGGCGTTCATT

Flanking Amino Acid:

DVIFTSGGTEANNMVIHTAL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

38.2

Major BPS

72.4

0.56

1.2

39.9

Major PPT

80.3

0.68

0.7

72.9

31.9

Minor 5ss

27.4

-2.6

3.5

36.8

47.7

Minor BPS

-0.5

2.4

55.89

Associated Gene:

Gene:

SCLY

Ensembl Gene ID:

ENSAPLG00000007985

Chromosome:

PEDO01018664.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008313

8411 - 13730

5320