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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018664.1_12983_13064_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12983 - 13064

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCCT

5'SS Class:

strong_major

3'SS Sequence:

CCTGGCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTGAC

U12 Branch Point Sequence:

ACAGCAGTGACG

Flanking Amino Acid:

WGNPSSAHPAGRKAKELIAG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.9

76.1

39.5

Major BPS

51.2

0.03

1.2

44.4

38.7

Major PPT

70.1

0.45

0.9

61.8

34.9

Minor 5ss

33.4

-1.9

3.4

48.4

47.3

Minor BPS

-0.9

2.2

42.26

42.8

Associated Gene:

Gene:

SCLY

Ensembl Gene ID:

ENSAPLG00000007985

Chromosome:

PEDO01018664.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008313

8411 - 13730

5320