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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018664.1_8667_9561_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

3UTR

Intron Coordinates:

8667 - 9561

Intron Length:

895

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTCTCGGG

5'SS Class:

weak_major

3'SS Sequence:

CCCCTCCTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTGCAT

U12 Branch Point Sequence:

GTTGCATTACCT

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.2

0.1

1.3

43.1

44.3

Major BPS

57.3

0.18

1.6

71.4

45.1

Major PPT

78.4

0.64

0.7

26.1

Minor 5ss

31.1

-2.2

3.3

39.6

45.7

Minor BPS

55.5

0.25

77.89

44.1

Associated Gene:

Gene:

SCLY

Ensembl Gene ID:

ENSAPLG00000007985

Chromosome:

PEDO01018664.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008313

8411 - 13730

5320