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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018667.1_786_960_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

786 - 960

Intron Length:

175

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAGGCTTT

5'SS Class:

weak_major

3'SS Sequence:

GCAGCTCTGTGAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

ATTTTTTAAGTC

Flanking Amino Acid:

LFLEGQWAMHEFLLLAFAD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.31

1.1

63.8

43.3

Major BPS

87.3

0.93

0.8

36.5

Major PPT

45.5

-0.2

1.7

50.2

43.7

Minor 5ss

52.1

0.07

3.1

78.1

37.7

Minor BPS

49.1

-0

1.8

63.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016925

Chromosome:

PEDO01018667.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046169

757 - 1897

1141