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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018685.1_3204_5232_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3204 - 5232

Intron Length:

2029

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTGAGTGGG

5'SS Class:

major

3'SS Sequence:

TGCTTCCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

ATGGGGTCACTT

Flanking Amino Acid:

FRPGHEYYYISASPPNMVDR

Intron Amino Acid Position:

123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.7

0.42

1.1

56.5

42.7

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

75.4

0.57

0.8

69.7

31.1

Minor 5ss

29.6

-2.3

3.2

45.3

Minor BPS

33.8

-1.1

2.4

49.45

44.9

Associated Gene:

Gene:

EFNA2

Ensembl Gene ID:

ENSAPLG00000017394

Chromosome:

PEDO01018685.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047757

1283 - 5439

4157