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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018731.1_693_1178_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

693 - 1178

Intron Length:

486

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGG|GCGGGGGGC

5'SS Class:

major

3'SS Sequence:

CCCCTGGGCTGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGGGCAG

U12 Branch Point Sequence:

GCAGCCGGAGCC

Flanking Amino Acid:

RTHRGPRVPQAPKAVGTVAA

Intron Amino Acid Position:

109

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.38

1.2

36.6

Major BPS

38.5

-0.7

1.7

42.8

49.4

Major PPT

44.9

-0.2

1.7

39.3

Minor 5ss

-4.4

3.7

13.3

29.3

Minor BPS

38.7

-0.8

2.2

44.69

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013933

Chromosome:

PEDO01018731.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014508

571 - 1675

1105