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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018754.1_2489_5962_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

2489 - 5962

Intron Length:

3474

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGCCC

5'SS Class:

major

3'SS Sequence:

TCCCCCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

GGGTCCCTGACG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

1.1

64.9

37.8

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

70.6

0.46

0.7

61.4

29.1

Minor 5ss

30.6

-2.2

3.5

42.1

44.9

Minor BPS

52.8

-0

1.8

57.27

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019207

Chromosome:

PEDO01018754.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028909

21 - 6639

6619