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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018754.1_2825_2881_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2825 - 2881

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTTGGGGGA

5'SS Class:

weak_major

3'SS Sequence:

AAAAGGGGCTCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCTAAA

U12 Branch Point Sequence:

GAACCCCTAAAA

Flanking Amino Acid:

DSGEPLEGTQGGWGTPQKGF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.6

0.16

1.3

43.4

Major BPS

60.4

0.26

1.1

61.5

32.5

Major PPT

46.9

-0.1

1.1

35.4

44.6

Minor 5ss

23.1

-3.1

3.3

20.9

37.8

Minor BPS

49.1

-0

1.8

58.88

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025237

Chromosome:

PEDO01018754.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023371

2440 - 3599

1160