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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018759.1_5402_6400_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5402 - 6400

Intron Length:

999

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTCCCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCCTCAG

U12 Branch Point Sequence:

CCAGCCTCAGCC

Flanking Amino Acid:

ERCGPSDFVAVFTRYGKCYT

Intron Amino Acid Position:

496

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

72.6

38.9

Major BPS

46.3

-0.2

1.6

53.3

44.2

Major PPT

81.6

0.71

0.7

77.1

24.9

Minor 5ss

31.1

-2.2

2.7

37.6

Minor BPS

45.8

-0.3

1.9

51.12

45.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017390

Chromosome:

PEDO01018759.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033201

3917 - 9239

5323