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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018759.1_7723_7801_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7723 - 7801

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAACCCTC

5'SS Class:

weak_major

3'SS Sequence:

CTTTTCCATGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTCAA

U12 Branch Point Sequence:

CAAATCTCAACC

Flanking Amino Acid:

KKYNKSEQYIGENILVLDIF

Intron Amino Acid Position:

709

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.8

0.37

1.3

47.1

Major BPS

76.9

0.67

0.8

77.7

26.1

Major PPT

82.7

0.74

0.8

77.9

29.7

Minor 5ss

47.5

-0.2

2.9

60.2

44.5

Minor BPS

0.01

1.6

57.36

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017390

Chromosome:

PEDO01018759.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033201

3917 - 9239

5323