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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018792.1_1222_2285_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1222 - 2285

Intron Length:

1064

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GCG|GCAGCGGCC

5'SS Class:

weak_major

3'SS Sequence:

CCGACCAGCGCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACTTGAC

U12 Branch Point Sequence:

GTGCACTTGACC

Flanking Amino Acid:

GPGRSGGSVRRENASRSLPA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.6

0.23

1.4

62.4

38.1

Major BPS

65.1

0.38

39.5

Major PPT

53.7

0.09

46.4

35.1

Minor 5ss

24.8

-2.9

4.5

41.4

45.6

Minor BPS

58.1

0.24

1.6

65.44

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016934

Chromosome:

PEDO01018792.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035788

1085 - 3301

2217