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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018794.1_296_379_R

Intron Information:

Intron Rank:

148991

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

296 - 379

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AA

5'SS Sequence:

CAA|GTGTCTTCT

5'SS Class:

weak_major

3'SS Sequence:

CATCCTTGCACAA|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AAGTGAT

U12 Branch Point Sequence:

CACCCCCAAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.1

0.26

1.2

63.9

36.8

Major BPS

64.7

0.36

1.2

55.1

42.1

Major PPT

-0.5

3.1

56.2

38.5

Minor 5ss

52.7

0.09

2.3

67.4

37.7

Minor BPS

45.8

-0.3

54.58

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027612

Chromosome:

PEDO01018794.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024615

21 - 1416

1396