Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018796.1_1119_1243_R

Intron Information:

Intron Rank:

131744

Intron Class:

major

Intron Phase:

Intron Coordinates:

1119 - 1243

Intron Length:

125

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGGGCCAA

5'SS Class:

major

3'SS Sequence:

AATCATCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAATCAT

U12 Branch Point Sequence:

GGTTGATTGACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.5

0.34

1.1

42.7

Major BPS

68.1

0.45

1.1

69.7

35.6

Major PPT

0.36

0.9

55.5

40.1

Minor 5ss

29.9

-2.3

3.2

43.6

Minor BPS

49.7

-0

2.1

65.46

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018083

Chromosome:

PEDO01018796.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029648

21 - 1740

1720