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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018810.1_2564_2653_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2564 - 2653

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGCGTC

5'SS Class:

major

3'SS Sequence:

CGGCTGGCCCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CGCTCAT

U12 Branch Point Sequence:

TCATGCCCAACG

Flanking Amino Acid:

ETILAHSESVELGKASQHDL

Intron Amino Acid Position:

350

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

68.4

36.9

Major BPS

67.4

0.43

1.2

38.9

Major PPT

48.1

-0.1

1.1

40.4

38.5

Minor 5ss

35.6

-1.6

3.5

46.6

43.5

Minor BPS

44.2

-0.5

2.3

53.28

46.9

Associated Gene:

Gene:

SEMA6B

Ensembl Gene ID:

ENSAPLG00000028933

Chromosome:

PEDO01018810.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028881

21 - 4315

4295