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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018841.1_652_2193_R

Intron Information:

Intron Rank:

149554

Intron Class:

major

Intron Phase:

Intron Coordinates:

652 - 2193

Intron Length:

1542

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTATG

5'SS Class:

strong_major

3'SS Sequence:

TGTTCCCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTGAA

U12 Branch Point Sequence:

GTCCTCTGAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

77.8

38.7

Major BPS

69.8

0.49

37.5

Major PPT

80.8

0.69

0.8

74.3

30.8

Minor 5ss

33.5

-1.9

2.8

34.2

41.4

Minor BPS

0.26

1.5

65.34

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027991

Chromosome:

PEDO01018841.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027680

21 - 3233

3213