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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018848.1_3727_5002_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3727 - 5002

Intron Length:

1276

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTTAATCTC

5'SS Class:

weak_major

3'SS Sequence:

TGTGCACACCTAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCACAC

U12 Branch Point Sequence:

CTGTGCACACCT

Flanking Amino Acid:

SLRLLQGVSMLNSLRTRQCL

Intron Amino Acid Position:

996

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.8

0.07

1.3

54.9

42.2

Major BPS

52.6

0.07

1.1

60.7

37.6

Major PPT

57.8

0.18

48.5

39.8

Minor 5ss

37.4

-1.4

3.1

41.2

Minor BPS

40.7

-0.6

2.3

60.63

48.6

Associated Gene:

Gene:

MFHAS1

Ensembl Gene ID:

ENSAPLG00000022505

Chromosome:

PEDO01018848.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046755

3684 - 8187

4504