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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018953.1_4305_5877_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4305 - 5877

Intron Length:

1573

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGAA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCTTGACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTACAAA

U12 Branch Point Sequence:

TTCTTCTTGACA

Flanking Amino Acid:

KCCPKCVSDTADKPCAEIKD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

78.3

31.1

Major BPS

0.15

1.3

65.4

Major PPT

82.2

0.72

0.9

79.6

32.5

Minor 5ss

28.5

-2.5

3.5

37.1

47.5

Minor BPS

78.2

0.88

1.1

81.74

33.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021826

Chromosome:

PEDO01018953.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026086

3991 - 9408

5418