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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018953.1_7022_7966_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7022 - 7966

Intron Length:

945

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCTTCT

5'SS Class:

major

3'SS Sequence:

TATTTAGTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

GATTTCTTAATC

Flanking Amino Acid:

CGFPVEDVEQARVADGSMYT

Intron Amino Acid Position:

162

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

1.2

72.5

39.7

Major BPS

0.92

0.9

86.2

29.1

Major PPT

80.2

0.68

0.9

40.3

Minor 5ss

47.3

-0.3

2.8

68.6

Minor BPS

76.1

0.8

1.1

76.03

33.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021826

Chromosome:

PEDO01018953.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026086

3991 - 9408

5418