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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018968.1_3481_3586_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3481 - 3586

Intron Length:

106

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CCCCCCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTTAC

U12 Branch Point Sequence:

TTCCTCTTACCC

Flanking Amino Acid:

VLRFLRFHLDRTESRFPASE

Intron Amino Acid Position:

242

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.98

0.9

86.7

21.3

Major BPS

69.2

0.48

37.1

Major PPT

67.8

0.4

0.7

60.8

21.8

Minor 5ss

18.2

-3.7

3.6

26.4

36.8

Minor BPS

61.9

0.35

1.6

71.01

40.5

Associated Gene:

Gene:

PLEKHH3

Ensembl Gene ID:

ENSAPLG00000029555

Chromosome:

PEDO01018968.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021763

2313 - 5628

3316