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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018968.1_3795_3984_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3795 - 3984

Intron Length:

190

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGGCC

5'SS Class:

strong_major

3'SS Sequence:

TGTCTCGCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTCAC

U12 Branch Point Sequence:

CGCGCAGTCACC

Flanking Amino Acid:

AISSHTTAEEVARELVSRLG

Intron Amino Acid Position:

312

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

71.9

33.4

Major BPS

54.8

0.12

1.2

58.7

38.1

Major PPT

70.9

0.47

0.9

61.9

39.9

Minor 5ss

-2.9

3.3

32.7

42.5

Minor BPS

36.6

-1

2.4

43.26

44.3

Associated Gene:

Gene:

PLEKHH3

Ensembl Gene ID:

ENSAPLG00000029555

Chromosome:

PEDO01018968.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021763

2313 - 5628

3316