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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019027.1_1711_2495_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1711 - 2495

Intron Length:

785

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAACC

5'SS Class:

strong_major

3'SS Sequence:

CCTTGTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CGCTGAC

U12 Branch Point Sequence:

CGGCGCTGACCC

Flanking Amino Acid:

MASMTDQQAEARAF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

74.3

34.1

Major BPS

53.9

0.1

1.2

46.4

38.9

Major PPT

82.5

0.73

0.8

76.3

32.3

Minor 5ss

34.9

-1.7

2.9

42.4

38.2

Minor BPS

40.6

-0.7

45.13

Associated Gene:

Gene:

TNNC2

Ensembl Gene ID:

ENSAPLG00000029922

Chromosome:

PEDO01019027.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027367

1699 - 5059

3361