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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019027.1_2548_2654_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2548 - 2654

Intron Length:

107

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGCGAG

5'SS Class:

major

3'SS Sequence:

CCCATCCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCCCAT

U12 Branch Point Sequence:

CAGCCCCGACCC

Flanking Amino Acid:

RAFLSEEMIAEFKAAFDMFD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

61.1

39.6

Major BPS

48.9

-0

1.3

39.1

Major PPT

0.41

0.8

61.2

Minor 5ss

30.4

-2.2

3.3

34.2

43.1

Minor BPS

-0.7

1.9

46.77

41.7

Associated Gene:

Gene:

TNNC2

Ensembl Gene ID:

ENSAPLG00000029922

Chromosome:

PEDO01019027.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027367

1699 - 5059

3361