Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01019064.1_809_892_R

Intron Information:

Intron Rank:

149207

Intron Class:

major

Intron Phase:

Intron Coordinates:

809 - 892

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGCCTG

5'SS Class:

major

3'SS Sequence:

CCTCCCCGCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCCCAC

U12 Branch Point Sequence:

CCTCCCCGCACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

46.2

Major BPS

53.6

0.09

1.2

64.1

33.9

Major PPT

66.5

0.37

0.9

60.1

29.6

Minor 5ss

36.5

-1.5

3.2

48.4

47.2

Minor BPS

42.9

-0.5

2.1

54.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027787

Chromosome:

PEDO01019064.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023897

21 - 1165

1145